Qlucore Diagnostics - New software for precision diagnostics

Introduction

This video gives a short introduction to Qlucore Diagnostics, a unique software that provides a solution building on the requirements of the future. Qlucore Diagnostics enables RNA-seq based precision diagnostics...

Biomarker Workbench for set up of multiple statistical tests

Introduction

The Biomarker workbench is optimized for drug development and biomarker discovery and it makes advanced set up of statistical analysis easy and accessible for the user. This video shows how to...

Easy and fast ChIP-seq

Introduction

Performing peak analysis is quick and easy in Qlucore Omics Explorer. With the interactive Genome Browser, you add filters to the ChIP-seq data to quickly find locations of the peaks for...

Analyze gene fusions in Gene Fusion Workbench

Introduction

The gene fusion analysis support enables fast and easy analysis and visualization of detected gene fusions. The fusions can be thoroughly examined in the genome browser and visualized in the Circle plot.  The workbench...

Qlucore Omics Explorer 3.7

Introduction

The new version adds functionality for enhanced biomarker discovery, easier analysis, and further improvements in visualization. This video focus on the new Biomarker Workbench and the ChIP-seq functionality. Other new...

Make new discoveries in your data using different plot types

Webinar

The webinar shows how you can interactively work with your data to make new discoveries using PCA plots with networks, heatmaps with hierarchical clustering, kmeans++ clustering and t-SNE plots. We...

RNA-seq and Single cell data analysis

Webinar

The webinar shows examples on how to work with RNA-seq as well as Single cell data. We will use different public datasets from various sources like 10X Genomics, TCGA and...

Proteomics and Metabolomics data analysis

Webinar

The webinar shows examples on how to work with Proteomics as well as Metabolomics data. We will use different public datasets and visualize and interactively work with data using various...

Pathway analysis with Gene Set Enrichment Analysis (GSEA)

Webinar

How to use Gene Set Enrichment Analysis (GSEA) to analyze datasets using functional information such as pathways in Qlucore Omics Explorer. The GSEA workbench is fully integrated in Qlucore Omics...

User testimonial: Brigham and Women´s Hospital in Boston, USA

Webinar

Watch the video to learn what Dr. Kevin Wei, Instructor in Medicine at Brigham and Women´s Hospital, Boston, USA, say about using Qlucore Omics Explorer.

Value using Qlucore Omics Explorer

Introduction

Watch the video to learn more about the benefits of using Qlucore. Listen how MD, PhD, David Gisselsson Nord Research Group Leader, Principal Investigator, Lund University, Sweden, are using Qlucore...

Strategies to prioritize and filter our results

Webinar

Big data comes with big results, especially when you are in a discovery mode. How do you filter 10,000 findings for meaningful and actionable ones? We will look at different...

Correlation - how to identify and visualize correlated variables.

Webinar

The webinar focus on how to work with variable correlation and some features related to that. E.g. finding correlated variables, visualizations in variable PCA plots, scatter plots, line plots, searching...

Import RNA-seq data

Introduction

1 minute video. There are several ways to import RNA-seq data into Qlucore Omics Explorer. Watch this brief introduction on how to perform direct import of BAM files, and how...

Introduction Box plots

Introduction

1 minute video. Learn how to use the box plot and some of the many configuration options it has in Qlucore Omics Explorer. It is easy and fast to set-up...

Create plots easily

Webinar

The webinar we show how you can interactively work with your data utilizing the wide range of plots available in Qlucore Omics Explorer, also introducing Venn diagrams, Volcano plots, Box...

Easy access to different type of public data

Webinar

In this webinar we will show the inbuilt methods for easy access and download to public data. The program offers several ways to get access to data easily, such as...

Genomic Analysis

Webinar

In this webinar we demonstrate how to work with the NGS Project Manager and the integrated Genome browser. We look at Variant Calling, visualizing samples and reference information (using project...

Explore data from chronic liver disease and find other related public datasets

Webinar

Qlucore Omics Explorer and Genevestigator are two complementary tools/services, which when used together provides the end user with increased value and analysis options. This webinar demonstrates an indepth analysis of...

Proteomics, RNA-seq and Single cell data analysis

Webinar

In this webinar we will show examples on how to work with different data types e.g. Proteomics, RNA-seq data as well as Single cell data. We will use different public...

How to set-up and configure different plots

Webinar

In this webinar we will go through how to set-up and configure plots. Single plots and synchronized plots will be presented. Details about preparing a plot for publication will also...

Educational Webinar - Correlation, lists, 2D plots and coloring

Webinar

Learn how to use the correlation tool in Qlucore Omics Explorer, how to generate lists in different ways and how to compare lists in Venn Diagrams. Qlucore offers a number...

Introduction Qlucore Omics Explorer version 3.6

Webinar

In Qlucore Omics Explorer 3.6 we are adding new features in several areas to make analysis easier and faster. Examples are: The new Fusion Gene Workbench, direct import of 10X...

Introduction Qlucore Omics Explorer version 3.6

Introduction

In this release we are adding features in several different areas to make data analysis easier and faster. Examples are how to add Hazard Ratios working with survival analysis, direct...

Introduction to Qlucore Omics Explorer

Webinar

Quick and easy to use bioinformatics analysis software. This introduction webinar introduces basic functionality and plots. With Qlucore Omics Explorer you can analyze Omics and NGS data sets from a...

Introduction to kmeans++ clustering

Introduction

1-min video. Fast and easy to use bioinformatics analysis software. This video introduces kmeans++ clustering and silhouette plot functionality. With Qlucore Omics Explorer you analyze Omics and NGS data sets...

Introduction to Templates

Introduction

1-min video. Qlucore Omics Explorer includes a powerful functionality called Templates. These Templates are very powerful and easy to use. With very few key clicks, you can run a complete...

Introduction to t-SNE plot.

Introduction

1-min video.Short introduction showing how Qlucore Omics Explorer provides easy to use t-SNE plots and the tools you need for single Cell analysis. The t-SNE plot is as easy to...

Introduction to the Venn diagram plot and the Set tool

Introduction

1-min video. Introduction to the Venn diagram as an excellent tool to visualize overlap and interaction between lists. It is easy to set up and configure the plot. In combination...

Explore and find patterns in your data

Introduction

Qlucore includes powerful methods to quickly explore large data sets. In this video we demonstrate how the fast generation of PCA plots in combination with the projection score metric allows...

Heatmaps for instant visualization

Introduction

1 min video. Short introduction to Heatmaps. Qlucore provides super-fast and easy ways to generate heatmaps and configure them to your liking. See how the heatmap changes instantly if you...

Finding interesting variables in your data

Introduction

1 min video. Short introduction to Qlucore and how you can find significant variables using the inbuilt powerful statistical methods - with just a few mouse clicks. Watch this video...

How do I keep track of my analysis?

Webinar

Keeping track of analysis. We often get the question “How do I best keep track of my analysis?” In this webinar we will demonstrate the tools that are available in...

What is the dimension of a data set?

Webinar

We will describe what the dimension of a data set is and how to know if the first 3 dimensions of the PCA plot is enough to capture the complexity...

Single cell RNAseq

Webinar

Qlucore Omics Explorer includes a set of features directed specifically towards single-cell RNA-seq analysis. These features are t-SNE plots, better quality control and data filtering and subsampling of data sets...

Focus Next-Generation Sequencing

Webinar

Qlucore Omics Explorer offers a set of NGS focused tools, centered around the Genome Browser. This webinar will show the Genome Browser, how it is used, and how it can...

Introduction New Templates in Qlucore Omics Explorer 3.5. PART 2 of 2

Webinar

Templates is a new feature set added in Qlucore Omics Explorer 3.5 which allow you to create your own scripted workflows for the software. This webinar will show that Templates...

Introduction New Templates in Qlucore Omics Explorer 3.5 - PART 1 of 2

Webinar

Templates is a new feature set added in Qlucore Omics Explorer 3.5 which allows you to create your own scripted work-flows for the software. This webinar will show what Templates...

Introduction Qlucore Omics Explorer version 3.5

Webinar

Workflow templates, much richer 2D plot configurations and data dimensionality estimation are some of the new functionality in Qlucore Omics Explorer 3.5 that is presented in this webinar. 45 min.

Specific functionality in Qlucore Omics Explorer

Webinar

In this webinar we are highlighting specific and useful functions such as t-sne plots, variable pre-filtering and the annotation wizard.

Maximize the Impact of Visualization-driven Omics Data Analysis

Webinar

The webinar illustrates visualization-driven data analysis with a live software demonstration, share insights driven from in-depth visual data inspection.

30 min Introduction to Qlucore Omics Explorer

Webinar

A brief introduction to the features in Qlucore Omics Explorer. Walkthrough of the work modes, data types, synchronized RNA seq analysis and the NGS module.

Data-driven identification and exploration of public transcriptomic studies

Webinar

Qlucore Omics Explorer and Genevestigator are two complementary tools/services which when used together provide the end user with increased value and analysis options. This webinar shows a use case demonstration...

Analyzing metabolomics data with Qlucore

Webinar

Qlucore Omics Explorer works well for analyzing many different types of data. This webinar will demonstrate how you can analyze metabolomics data with Qlucore.

Using the NGS module to analyze RNA-seq data

Webinar

Learn to connect RNA sequensing to Genome Browser.

Short introduction to the NGS module

Introduction

Demo film

Introduction

5 min video. All analysis is instant in Qlucore Omics Explorer. The software includes a range of powerful tools and statistical filters, but is also very easy to use. It...

How to use the R interface

Webinar

A webinar on how to use the R interface.

Analyze RNA-seq data

Webinar

Analsyis of RNA seq data in Qlucore. Presented by Charlotte Soneson.

Projection Score in Qlucore Omics Explorer

Webinar

Learn how to use the Qlucore tool Projection Score in data exploration. See also White Paper - Projection Score Projection Score - Hypotheses generation and new findings

Finding Clusters and Structures in Data

Webinar

A webinar introducing data exploration tools to finding structure and clusters in data. The demonstration is based on a publicly available data set easily downloaded by the inbuilt GEO download...

Using and managing annotations

Video Tutorial

5 min video. Learn how to import variable and sample annotations.

Working with variable lists

Video Tutorial

5 min video. Learn how to create, update and work with variable lists.

Finding discriminating variables

Video Tutorial

5 min video. Learn how to use Qlucore Omics Explorer to identify discriminating variables (i.e. differential expressed genes), visualize, and save your results. Different statistical tests are introduced.

Import data with the Wizard

Video Tutorial

5 min video. Detailed instruction video on how to import data using the wizard.

Loading Data

Video Tutorial

Learn how to import different types of data into Qlucore Omics Explorer.

Getting started

Video Tutorial

Introduction to Qlucore Omics Explorer and some of the basic functionalities.